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API & reference standards

Pantoprazole sodium sesquihydrate

Pantoprazole sodium sesquihydrate is listed in the API and reference-standard collection under CAS 164579-32-2. Its represented structure has formula C32H34F4N6Na2O11S2 and a calculated molecular weight of 864.76 g/mol.

2D chemical structure

O N S O N O F F N - O O N S O N O F F N - O H 2 O H 2 O H 2 O N a + N a +

Chemical identity

Catalog name
Pantoprazole sodium sesquihydrate
Common name
Pantoprazole sodium sesquihydrate
Chemical name
disodium;5-(difluoromethoxy)-2-[(3,4-dimethoxypyridin-2-yl)methylsulfinyl]benzimidazol-1-ide;trihydrate
CAS
164579-32-2
SMILES
COc1ccnc(CS(=O)c2nc3cc(OC(F)F)ccc3[n-]2)c1OC.COc1ccnc(CS(=O)c2nc3cc(OC(F)F)ccc3[n-]2)c1OC.O.O.O.[Na+].[Na+]
InChI
InChI=1S/2C16H14F2N3O4S.2Na.3H2O/c2*1-23-13-5-6-19-12(14(13)24-2)8-26(22)16-20-10-4-3-9(25-15(17)18)7-11(10)21-16;;;;;/h2*3-7,15H,8H2,1-2H3;;;3*1H2/q2*-1;2*+1;;;
InChIKey
VNKNFEINTHUQGZ-UHFFFAOYSA-N
Associated API
Pantoprazole Sodium Sesquihydrate

Record ID: Ae02ff04ff604

Computed properties

C32H34F4N6Na2O11S2 Molecular formula
864.761 g/molMolecular weight
864.1458 DaMonoisotopic exact mass
263.78 ŲTopological polar surface area
-3.4393 Calculated LogP (Wildman–Crippen)
189.1382 cm³/molMolar refractivity (Wildman–Crippen)
12 countHydrogen-bond acceptors
0 countHydrogen-bond donors

Descriptors are calculated from the displayed SMILES. Calculated LogP is not a measured partition coefficient or a pH-specific LogD. The SMILES contains 7 disconnected components. Calculations retain all represented components. 2 potential atom stereocenters have unspecified configuration.

Molecular descriptor profile

Descriptor radar

Mol. weight LogP TPSA HBA HBD Rotatable 25 50 75 100

Structural feature counts

0 4 8 12 Count H-bond acceptors H-bond donors Rotatable bonds Rings Aromatic rings Stereo centers

Element composition

C F H N Na O S 0 8 16 24 32 Number of atoms

Radar scale: 0–100 percentile within 25,771 distinct represented structures in this release, using the midpoint rank for ties. Larger values indicate a higher descriptor rank, not greater safety or toxicity. Element counts include hydrogen and combine isotopes under each element.

Radar values and percentile reference
DescriptorValuePercentile
Molecular weight864.76197.74
Calculated LogP (Wildman–Crippen)-3.43932.08
Topological polar surface area263.7897.97
Hydrogen-bond acceptors1295.82
Hydrogen-bond donors011.28
Rotatable bonds (strict)1495.92

Complete molecular descriptors

PropertyCalculated valueUnit / type
Molecular formulaC32H34F4N6Na2O11S2dimensionless
Molecular weight864.761g/mol
Monoisotopic exact mass864.1458Da
Topological polar surface area263.78Ų
Calculated LogP (Wildman–Crippen)-3.4393dimensionless
Molar refractivity (Wildman–Crippen)189.1382cm³/mol
Hydrogen-bond acceptors12count
Hydrogen-bond donors0count
Rotatable bonds (strict)14count
Heavy atoms57count
Heteroatoms25count
Rings6count
Aromatic rings6count
Aliphatic rings0count
Saturated rings0count
Aromatic heterocycles4count
Aliphatic heterocycles0count
Saturated heterocycles0count
Aromatic carbocycles2count
Aliphatic carbocycles0count
Fraction of sp³ carbon atoms0.25fraction
Formal charge0e
Disconnected components7count
Isotopically specified atoms0count
Potential atom stereocenters2count
Unspecified atom stereocenters2count
Spiro atoms0count
Bridgehead atoms0count
Labute approximate surface area370.5493Ų
Valence electrons300count
Radical electrons0count
Bertz complexity2,070.2773index
Balaban J0index

Ring categories overlap and should not be summed. No toxicity result, PDE, HBEL or acceptable intake is inferred from these descriptors.

Toxicological services and resources for Pantoprazole sodium sesquihydrate

PDE, HBEL and impurity assessment for Pantoprazole sodium sesquihydrate

For a substance-specific assessment, request a PDE report for Pantoprazole sodium sesquihydrate or explore HBEL derivation for Pantoprazole sodium sesquihydrate. These services address exposure limits using toxicological evidence and the intended use of the substance.

For pharmaceutical development, explore prediction of degradation products of Pantoprazole sodium sesquihydrate and qualification of impurities related to Pantoprazole sodium sesquihydrate.

Related Altox services and technical resources

Other catalogue designations with the same represented structure

These are separate catalogue entries; shared structure does not establish interchangeable pharmacopoeial designations.

Identity sources and calculation method

Identifiers originate from the source catalogues and available public identity records. InChI and InChIKey on this page are generated from the displayed SMILES. RDKit validation checks the molecular representation; it does not independently verify every catalogue assignment.

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